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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs10786670 chr10:104270781 G/A 6.52E-5 397 15.17 15.93 5.07 KM Plot
LGG rs10792313 chr11:61202225 G/C 2.96E-5 407 17.73 17.67 14.5 KM Plot
LGG rs10792314 chr11:61202303 G/A 2.96E-5 407 17.73 17.67 14.5 KM Plot
LGG rs10799699 chr1:21820961 C/T 0.000192 403 18.07 14.43 15.18 KM Plot
LGG rs10799700 chr1:21820968 G/C 0.000189 403 17.73 14.43 15.18 KM Plot
LGG rs10799701 chr1:21820990 A/G 0.000131 407 18.07 14.03 15.17 KM Plot
LGG rs10811685 chr9:22293804 C/T 1.4E-6 407 16.27 10.32 0 KM Plot
LGG rs10814049 chr9:33805304 G/A 2.38E-5 406 15.55 15.7 6.13 KM Plot
LGG rs10815181 chr9:5337542 C/T 0.000197 385 13.52 16.9 15.83 KM Plot
LGG rs10821968 chr10:63993905 C/T 0.000163 407 15.78 15.63 12.17 KM Plot
LGG rs10821973 chr10:64052337 G/A 0.000106 399 12.17 15.63 15.88 KM Plot
LGG rs10845413 chr12:12012106 T/C 1.46E-7 404 5.45 17.07 15.17 KM Plot
LGG rs10860790 chr12:102197729 T/G 2.48E-7 399 14.4 19.5 13.15 KM Plot
LGG rs10860797 chr12:102234742 G/A 2.36E-6 394 14.43 20.28 13.15 KM Plot
LGG rs1087086 chr1:74912655 A/G 4.89E-5 403 8.32 14.9 15.47 KM Plot